Some modules for the MC engine (5000/200 10vt) cars have minor pinout differences. If you want to be completely sure, you need to match the MAC code with one that's in your car. Auto/manual is just a cut wire in the harness, and afaik they're the same ECU part.
There's some pinouts on this site, and he explains the auto trans wire, too: http://www.plasticmedia.net/4ktq/4/index.htm
There's some pinouts on this site, and he explains the auto trans wire, too: http://www.plasticmedia.net/4ktq/4/index.htm
